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review of scientific and news articles on dna testing and popular genetics

Obama Shares Melungeon Ancestry with California Professor

Wednesday, September 21, 2011

San Diego State University professor D. Emily Hicks has traced some common ancestry with President Barack Obama. According to the professor of Chicana/o Studies, she and the President share Melungeon roots. Obama is a descendant of Mary Collins of Orange County, Virginia as well as of Nathaniel Bunch of Louisa County and John Bunch of New Kent--well known "feeder" counties for what became the Melungeon settlement described in Brent Kennedy's book, The Melungeons, The Resurrection of a Proud People.

Obama's Bunch line was found to carry E1b1a haplogroup, a sub-Saharan African male lineage. He is also supposed to have Cherokee ancestry in his mother's colonial genealogies.

Read the whole story at PRLOG.

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Replacement or Assimilation: Origin of Our Species

Wednesday, August 24, 2011

In a review of Chris Stringer's book The Origin of Our Species (Lane, 2011), Jean-Jacques Hublin sides with one of the first promoters of the 30-year old Recent African Origin hypothesis and supports the notion that modern humans out of Africa entirely replaced Neanderthals because they were, well, fitter and superior.

See "Palaeoanthropology:  African Origins" in Nature 476, 395 (August 25, 2011).

But could the true scenario have been that "we" were already hybridized with Neanderthals, and that's why "we" won out? Recent work has brought evidence that Neanderthals gave "us" our immunities to a wide range of disease and thus allowed "us" to survive. The question doesn't have to be an either/or dilemma.

Above:  Krapina Neanderthal Museum. N. Solic.

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Emerging Prehistory of Ethnic Groups

Thursday, June 16, 2011
As Revealed by Autosomal Markers

No scientific work, to our knowledge, has ever hazarded a guess on what the mutation rate for autosomal CODIS-type markers might be. Is it like mitochondrial DNA, which has a molecular clock measured in the thousands or tens of thousands of years, or is it like STRs on the Y chromosome, with its much shorter timeframe? The question is important if you are trying to extrapolate the history of the human race from today's autosomal population statistics.

From what we can see, putting on diachronistic lenses, the mutation rates for the DYS values on what are commonly called CODIS markers or the DNA profile for individuals are very small. The values appear to have been set from the beginning of mankind and to have mutated little in the past 100,000 years.

If this is true -- and it cannot be a very big "if" or we would have more diversity between populations than what is known -- the oldest markers are Sub-Saharan African and the newest European. Statistical divides bear out this reading of the human genetic record, as shown now in our updated map included with the DNA Fingerprint Plus.

We will try to make some notes on the individual markers in future posts.

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Pre-historic Arabia Crossroads for Early Humans (and Neanderthal Hybrids?)

Saturday, February 05, 2011
The Southern Route “Out of Africa”: Evidence for an Early Expansion of Modern Humans into Arabia

Science 28 January 2011: Vol. 331 no. 6016 pp. 453-456 DOI: 10.1126/science.1199113

By Simon J. Armitage, Sabah A. Jasim, Anthony E. Marks, Adrian G. Parker, Vitaly I. Usik, and Hans-Peter Uerpmann

Abstract

The timing of the dispersal of anatomically modern humans (AMH) out of Africa is a fundamental question in human evolutionary studies. Existing data suggest a rapid coastal exodus via the Indian Ocean rim around 60,000 years ago. We present evidence from Jebel Faya, United Arab Emirates, demonstrating human presence in eastern Arabia during the last interglacial. The tool kit found at Jebel Faya has affinities to the late Middle Stone Age in northeast Africa, indicating that technological innovation was not necessary to facilitate migration into Arabia. Instead, we propose that low eustatic sea level and increased rainfall during the transition between marine isotope stages 6 and 5 allowed humans to populate Arabia. This evidence implies that AMH may have been present in South Asia before the Toba eruption (1).

First paragraph.
The deserts of the Arabian Peninsula have been thought to represent a major obstacle for human dispersal out of Africa. AMH were present in East Africa by about 200 thousand years ago (ka) (2). It is likely that the first migration of AMH out of Africa occurred immediately before or during the last interglacial [marine isotope stage (MIS) 5e] (3). During MIS 6, the Afro-Asiatic arid belt was hyperarid, restricting movements of human populations out of Africa. Finds from Qafzeh and Skhul in the Near East, dated between 119 ± 18 and 81 ± 13 thousand years ago (ka) (4, 5), suggest that AMH first migrated along the “Nile Corridor” and into the Levant. 



The location of Jebel Faya, United Arab Emirates, along with key sites mentioned in the text. The dashed line represents the –120-m paleoshoreline, indicating the maximum exposure of land during marine lowstands. Science.

Did Modern Humans Travel Out of Africa Via Arabia?

By Andrew Lawler

Science 28 January 2011: 387. [DOI:10.1126/science.331.6016.387]


JEBEL FAYA, UNITED ARAB EMIRATES—The barren desert and hills here seem wholly inhospitable, with sparse rain and sandy soil supporting only a few nomadic Bedouin. But things were different 125,000 years ago, when the desert was savanna, with plentiful water and game, and under the protection of a rock overhang, a group of hominids whiled away their time making stone tools. A Germanled team argues on page 453 that these tools were made by modern humans who may have crossed directly from Africa as part of a migration spreading across Europe, Asia, and Australia. Although most researchers agree that our species came out of Africa in one or more waves (see p. 392), those dates are more than 50,000 years earlier than most believe our ancestors left the continent.

The audacious claim by Simon Armitage of Royal Holloway, University of London, and colleagues is sparking interest and controversy. “This is really quite spectacular,” says archaeologist Michael Petraglia of the University of Oxford in the United Kingdom, who has previously argued that Homo sapiens left Africa before the massive eruption of an Indonesian volcano 74,000 years ago, a catastrophe thought to have left much of Asia unlivable for early humans (Science, 5 March 2010, p. 1187). “It breaks the back of the current consensus view.” But others, such as archaeologist Paul Mellars of the University of Cambridge in the United Kingdom, say that although the discovery is important and well dated, the conclusions are flawed. “I'm totally unpersuaded,” he says. “There's not a scrap of evidence here that these were made by modern humans, nor that they came from Africa.”

The debate centers on a collection of stone tools found here at Jebel Faya, a long limestone mountain an hour's drive from the bustling urban center of Sharjah and 55 kilometers from the Persian Gulf. A rock shelter indents the mountain's end, a few meters above a desolate plain where only camels graze today. The overhang is modest, but it has sheltered humans for millennia, say excavators Hans-Peter and Margarethe Uerpmann of the University of Tübingen in Germany. They began digging here in 2003, uncovering artifacts from the Iron, Bronze, and Neolithic periods before hitting material from the Middle Paleolithic era, roughly 300,000 to 30,000 years ago. Using single-grain optically stimulated luminescence, which measures how much time has passed since materials were last exposed to light, the team dated the oldest set of artifacts, including stone hand axes, blades, and scrapers, to about 125,000 years ago.

Arabia and its fierce deserts have long been seen more as obstacles than conduits to human migration, and most archaeology here has focused on historical times. Recent studies, however, show wetter periods such as one that began around 130,000 years ago. And a spate of findings in the past 25 years show that hominins were in the region during the Middle Paleolithic. Early H. sapiens skulls and tools from Skhul and Qafzeh caves in Israel are now dated to 100,000 to 130,000 years ago, for example.

Co-author Anthony Marks of Southern Methodist University in Dallas, Texas, says the combination of artifacts from Jebel Faya, such as two-sided blades and small hand axes, is remarkably similar to assemblages made during this period in East Africa, when our own species was the only known hominin on that continent. Other hominins, such as the Neandertals who populated Europe and north Asia, did not use this combination of tools and were not likely to have been in Arabia, he says. That makes the African origin likely “by process of elimination.”

Marks says the tools don't resemble those from Israel or the Aterian tools from the same era in North Africa (Science, 7 January, p. 20). He suggests that H. sapiens may have left Africa in different waves, with the Arabian tools representing a migration launched from East Africa.

Petraglia agrees that it's likely that H. sapiens made the tools and that they came from Africa. “This is out of the habitat range of Neandertals,” he notes. “So they make a really strong and plausible argument.” The team believes that these early modern humans may have even pushed on across the Persian Gulf, perhaps to India, Indonesia, and eventually Australia. Petraglia claims evidence of early H. sapiens in India both before and after the Indonesian eruption, though others dispute that assertion.

Mellars, in contrast, sees no evidence that the Jebel Faya artifacts are of an East African style. He says one of the bifacials is stout rather than narrow like those common in Africa and adds that the authors have not ruled out Neandertals and even H. erectus as the toolmakers. “Everything hinges on whether that material is explicitly African—and I don't see that.”

Other researchers are enthusiastic about the Jebel Faya discovery but cautious about the conclusions. Archaeologist Mark Beech, a visiting fellow at the University of York in the United Kingdom who has worked extensively in the United Arab Emirates, praises the paper but adds: “One site does not confirm the out-of-Africa-via-Arabia hypothesis.”

Hans-Peter Uerpmann agrees, saying that fossil bones are needed “before we can be absolutely sure” that the tools were made by H. sapiens. Other researchers are hot on the trail: Petraglia leaves this month to continue work in Saudi Arabia, and other archaeologists plan to comb Arabian caves and sands for signs that our ancestors passed this way.


We've been saying as much all along.

See our blog post on Prehistoric Arabia.




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Age of African Populations Just Doubled

Friday, November 26, 2010
Date of Diepkloof Rock Shelter in South Africa
Increased from 60,000 to 130,000 Years

Science
26 November 2010:
Vol. 330 no. 6008 pp. 1174-1175
DOI: 10.1126/science.330.6008.1174-b

By John Bohannon



For the researchers who study the famed Diepkloof rock shelter in South Africa, the Preserving African Cultural Heritage meeting was both a coming-out party and a defense. Diepkloof is a key Paleolithic site, the home of 60,000-year-old decorated ostrich shells that are among the first signs of symbolism. Now the team suggests that sophisticated behavior there stretches back as far as 130,000 years ago—nearly twice as old as at any other site.

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Bradshaw Foundation, Stephen Oppenheimer, INORA

Wednesday, December 30, 2009
Bradshaw Foundation
www.bradshawfoundation.com

A Phoenix business contact recently turned me on to the most fascinating website I have yet encountered devoted to prehistoric times and the migrations of humans. Named after the age-old and stunning Bradshaw rock art inscriptions in Australia, the Bradshaw Foundation focuses on rock art around the world and the brilliant discoveries of Oxford geneticist Stephen Oppenheimer. Its website even offers films and podcasts. Here is how the organization describes itself:

The Bradshaw Foundation until now has been discovering, documenting and preserving ancient rock art around the world. In October 2004 it received the Science & Technology Web Award 2004 (Anthropology and Paleontology) from Scientific American Magazine. The award coincides with the launch of the Bradshaw Foundation's latest development on its website: "The Journey of Mankind -The Peopling of the World". The Foundation has created an interactive map charting the global journey of modern humans over the last 160,000 years. It demonstrates the interactions of migration with climate over this period. Based on a synthesis of the mtDNA and Y chromosome evidence with archaeology; climatology and fossil study; Stephen Oppenheimer has tracked the routes and timing of migration, placing them in context with ancient rock art around the world.

Another delight I discovered at the Bradshaw Foundation's site was INORA, International Newsletter on Rock Art.

With 3 publications per year, in French and English, INORA presents an international forum on ancient rock art and associated areas of archaeology, paleaontology and anthropology.

Edited by Dr Jean Clottes, Former Director of the Chauvet Research Team, funded (or subsidized, or sponsored) by the Ministère de la Culture and the Département de l’Ariège, the newsletter presents the latest discoveries of rock art from around the world. It provides a platform for discussion and debate of current theories and controversies. It examines past, present and future documentation and dating techniques, and their interpretation. It provides online database sources for related literature. The bound copy contains photography, illustrations and bibliographies.

DNA Consultants customers and especially those who have taken the DNA Fingerprint Test will want to check out these resources for understanding human prehistory posthaste! The Bradshaw genetic journey is far more detailed, absorbing and convincing than National Geographic's National Genographic Project. 

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FOX News Showcases DNA Consultants

Thursday, December 03, 2009
Dr. Yates was interviewed by WBRC reporter Jeh Jeh Pruitt of FOX News Alabama at the company offices in Phoenix on October 22. The report was broadcast on affiliate stations in late November. Watch it on MyFoxAlabama.com.


Comments

M. Moore commented on 15-Dec-2009 01:44 PM

I hope there are many more interviews with DNA Consultants. Kudos and Cheers!


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Halloween Story: Shades of Peking Man

Friday, October 30, 2009
Scary Findings in Guangxi Region


In a report published in the October 30 number of Science, Chinese paleoanthropologists claimed that the jawbone and teeth unearthed by them recently in the southern province of Guangxi represent a form of man 100,000 years old. Their interpretation of the fossil challenges the Western theory that claims our ancestors peopled the world in a migration out of Africa late in the last Ice Age, about 50,000 years ago. But there is more. American and European scientists stand to lose even more face if China's insistence is true that this early human is a hybrid with H. erectus, a more primitive species also known as Peking Man.

Discoverer Jin Changzhu pointed out that the jawbone curved outward, whereas that of the older species of H. erectus had an inward-sloping chin, and modern human chins generally fut out father than the Guangxi specimen's. Such an intermediate chin, he said, suggested interbreeding with H. erectus

In the West, paleoanthropologists and geneticists for the most part vehemently deny that any interbreeding between species of man could have taken place before our type emerged as the sole and supreme species favored by evolution. Neandertals, they claim, were replaced by modern humans in Europe and died out without a trace in the genetic record about 30-40,000 years ago. 

"The initial publication makes shaky claims based on preconceptions," scoffed Tim White, a paleoanthropologist at the University of California, Berkeley.

The title of the report is "Signs of Early Homo sapiens in China?" It was written by Richard Stone and published on page 655 of Vol. 326, no. 5953, of Science.

The confrontation reminds many of the battle over Peking Man dated to about 500,000 years old. At first, the Chinese maintained that East Asian people were descendants of Peking Man (and not of Africans or out-of-African humans). Later, they modified their view and held that modern Asians represent a hybridization with Peking Man. Possibly all the "races" or continent-specific forms of modern man are the result of anatomically modern humans interbreeding with more primitive hominids in their part of the world. 

We wonder why Western scientists are in such a huff about the conclusions of Chinese paleontologists since there is solid proof of admixture between modern humans and archaic human groups like Neandertals, Homo erectus and Homo floresiensis (the fossils of "hobbits" discovered in Indonesia in 2004). One instance among many of publications demonstrating this possibility is:  Jeffrey D Wall, "Detecting Ancient Admixture and Estimating Demongraphic Parameters in Multiple Human Populations," Molecular Biology and Evolution, vol. 26, no. 8 (August 2009), pp. 1823-27.

Perhaps the right hand of genetics doesn't know what the left hand of anthropology is doing or saying in this country.


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